5880ed44c7013b4897bcbe7ad82220e0 *DESCRIPTION
e6022153cd08ea72875a38f70c40e2f9 *NAMESPACE
915b192a39ceeb1806ea9ae899b069b9 *R/RcppExports.R
b228586fb83ac547f9ee45b5be50419b *R/data.R
1d325e9d2f18464097756b871f5835f1 *R/scistreer.R
c53076a03bad14d54245a95403bfc091 *R/vars.R
dc415935c53afaea42a5be581f66c717 *R/vis.R
81913a69e125523f0a3140ba1ba37920 *R/zzz.R
9ee8a0507828dc52484d5c31c153c276 *README.md
31accc59ded535fab4dbe288e6a825aa *data/P_example.rda
14a846e58801480b68e38cf29841db4c *data/P_small.rda
00c7714dcb723542bc4392d1a944b479 *data/gtree_small.rda
9565d4acfa78b196b59e7c43242212cb *data/mut_nodes_small.rda
21532e29048788d141633d1446899d95 *data/tree_small.rda
d3fddd12221faedfbd20f67f15def059 *data/tree_upgma.rda
7eec2dc9f00349e6ce59bf81f829f880 *man/P_example.Rd
3fcc1205dd8823dc5bf4d7bf8c0656d2 *man/P_small.Rd
e37a05e196ca6397dcaf48e5520ae325 *man/annotate_tree.Rd
3baa05cbe316c27eb30c80db6c1c0889 *man/get_mut_graph.Rd
dddc442e758925c31c9c8c554638aeef *man/gtree_small.Rd
bb8c77ce5f66d04c793fd68540294bcf *man/label_edges.Rd
aae27a554b94a6372f47fe04153415d3 *man/ladderize.Rd
bd819183302c374b2c23ab1c99829196 *man/mut_nodes_small.Rd
78a71974e27ec39e3f35b65fb091d45e *man/mut_to_tree.Rd
da4d8e6cf9a3426a789b2ee6105dd117 *man/perform_nni.Rd
0bc6f70e80bce0ee03e3477763424d11 *man/plot_phylo_heatmap.Rd
574c951e0ee28f23eb2a7262009a8c6a *man/run_scistree.Rd
9c261f6206f55f1440fc676892897904 *man/score_tree.Rd
75ac5d30d4c0b210914f2c8a7d94c19d *man/to_phylo.Rd
f6bf9550ac55c332c33bbe92e4ec8c86 *man/transfer_links.Rd
2d226ab24f3a1a6561666c5df3c076f1 *man/tree_small.Rd
e76aba6487a1742abf48f50309fd883a *man/tree_upgma.Rd
d84ce45f027263dc4159f550cd5fb5b6 *src/Makevars
a23ffe8c6afc95b0dacc3f89b42eef4b *src/Makevars.win
81b5ad73378808d1eb7b59446b1dfcdc *src/RcppExports.cpp
2629555673979e4f11eaa60f8446febb *src/scistreer.cpp
482ecd6cd87488717be61932257a78c4 *tests/testthat.R
a68ed758a396d701153a8c55fd7ec648 *tests/testthat/test_functions.R
