18760de0fec8b5b5dff7e06274d4ee59 *DESCRIPTION
32b22d5d0feec3fee6ebf07f6f0ac63f *NAMESPACE
9b687d9b2945612989c262ff10dedcda *NEWS.md
460a79b90c42486758335a24e5a9dedc *R/as-reeb-graph.R
c58cd0346ceb6bc410f5ab50b31a43b6 *R/class-reeb-graph.R
85396fda5e0ba6f0dbfe5dcd943c9a2b *R/data.R
f7bf2d6192a657f1850cca805ddf220b *R/onLoad.R
9cb3faf4351bb48fae165d569fdfeb0a *R/reeb-graph-pairs.R
830732951658e730f237f118b12b7258 *R/reeb-graph-persistence.R
2c4b9021229e3a47d5ed575213a3d7c1 *R/rgph-package.R
661153b332922732dd24a72ab3516f8c *README.md
7f2094c7b4d5faa522b624cffc621f8b *build/partial.rdb
64fa788fde44f2943bbebf6d9fa14b06 *build/vignette.rds
ca73c4342dd8edcf698813b380c5b72c *configure
ca73c4342dd8edcf698813b380c5b72c *configure.win
98ab1c8dc150da33308c5e20fdeb898d *data/buddha.rda
b423c81f72adfc2d1b966576728cc58b *data/david.rda
c36fa129c9201a3949a19c5722c405c6 *data/flower.rda
c0091b398e5404806850699a6c6e447b *data/topology.rda
4b97bfb51ae3da2d1e26c576c8b624c2 *inst/doc/benchmark.R
78bf1632c07a014654d6402b8dc2b032 *inst/doc/benchmark.Rmd
e10087f255819f94a32afcfb1e45e071 *inst/doc/benchmark.html
a409eea869b4da1d51b9f7ecae00fd41 *inst/extdata/1000_tree_iterations.txt
32d9718ebec97f4df3788b9561a2992a *inst/extdata/100_tree_iterations.txt
df330314cce23293170f3a98214cbb34 *inst/extdata/10_tree_iterations.txt
8cd22a625d1152c90efdba4085f8d67d *inst/extdata/running_example.txt
6ea18f3f52c8600679c1ed355a24c7c1 *inst/java/ReebGraphPairing.jar
8eaf7803611a88b222f1b7a59bfc8352 *inst/java/lib/JOCL-0.1.9.jar
f2f515b80d37ec8c7210a6e2c93a8d4e *inst/tinytest/test-as-reeb-graph.R
b9cdb9fce1e3cf92a681eda35d8aac2b *inst/tinytest/test-reeb-graph-pairs-degenerate.R
10db222afa13e58243a27573909e802c *inst/tinytest/test-reeb-graph-pairs-methods.R
8efa847c3ab2eac03f51a700ac0ae517 *inst/tinytest/test-reeb-graph-persistence-coercion.R
f067c39063df0f243cf7c8e0ba683fb4 *inst/tinytest/test-reeb-graph-persistence.R
9b2c08409fef0f32d00a2c79e1db5e92 *java/opencl/usf/saav/topology/join/parallel/bitonic_sort.hcl
fd5d4722ca3f72d4c031637537718baf *java/opencl/usf/saav/topology/join/parallel/common.hcl
363902366a125006130771ac84bec04c *java/opencl/usf/saav/topology/join/parallel/critical_point.hcl
0387ddf659b5c0930e155e166cd70379 *java/opencl/usf/saav/topology/join/parallel/heap.hcl
86f652d02ed73b2fea9ca8cf24bd3b7b *java/opencl/usf/saav/topology/join/parallel/histogram.hcl
6f67c3256ab967439e77b83937e07e4f *java/opencl/usf/saav/topology/join/parallel/kernel_cps_bucket_sort.cl
0ce01130408fdc09361ac831e545d81b *java/opencl/usf/saav/topology/join/parallel/kernel_cps_extract.cl
5ef6cc002616a1d86040c4f5801eeca1 *java/opencl/usf/saav/topology/join/parallel/kernel_cps_propagate.cl
1b1c9faca8f3e2c53b914602cd964759 *java/opencl/usf/saav/topology/join/parallel/kernel_djs.cl
bc6c27d7ce3ec7f93183f29a6f2ede3f *java/opencl/usf/saav/topology/join/parallel/old.hcl
63522a1de67e9205b43561c4bd0963f6 *java/rjava-research-package.iml
0fd64b2d3b766f7e4e2fe15ba2eb4cc3 *java/src/usf/saav/cmd/FuildTestCLI.java
941c7d36832840d8da5fe7fd09b17743 *java/src/usf/saav/cmd/MergePairingCLI.java
a98431cac5863d6eb4fd60db863424b8 *java/src/usf/saav/cmd/MergePairingInput.java
5d783ccbebcbf9458e5dc8631412ea3e *java/src/usf/saav/cmd/MultipleTestCLI.java
f75ef107166f70c9086231cf5504879a *java/src/usf/saav/cmd/PPPairingCLI.java
f3e38ce26c27cc2c9a53803e22ebab44 *java/src/usf/saav/cmd/PairingResult.java
8c9fda9f0ba803bf8bcdf15e0204413f *java/src/usf/saav/cmd/RandomLoopTestCLI.java
64ac0d7d75fecd0e436a08786fc76602 *java/src/usf/saav/cmd/ResultList.java
68d6514a4b2840741fff0a9400f41491 *java/src/usf/saav/cmd/SingleTestCLI.java
0405c0c8ab4197f9fb6ccd497743c211 *java/src/usf/saav/cmd/TestResults.java
27af6c43091952bf2bf5e5d397907871 *java/src/usf/saav/common/EventTimer.java
411302848ba6b9ef1cb47dd5fbf45bea *java/src/usf/saav/common/HashDisjointSet.java
ac0082a5f7daa95e8b8ef6cba822f741 *java/src/usf/saav/common/SystemX.java
adb1a18d7fc083c67787567fd57c9c47 *java/src/usf/saav/common/Timer.java
bc4c9121cbcfc78057cb6d88e42128fb *java/src/usf/saav/common/TimerAverage.java
b404421ddb123ccbc01e69842ea6de3d *java/src/usf/saav/common/TimerMillisecond.java
b5ff8652759582be4c84689ad4172a86 *java/src/usf/saav/common/TimerNanosecond.java
324e2ac3e58dab4c09f048d693728217 *java/src/usf/saav/common/algorithm/ArrayDisjointSet.java
bb7153f8a99cb07db2bc201596fa2199 *java/src/usf/saav/common/algorithm/ConnectedComponent.java
2c5a8a204940d420b0f25f5247598e4e *java/src/usf/saav/common/algorithm/HashDisjointSet.java
7dc7137270cebac1dbfa9849f55feb48 *java/src/usf/saav/common/algorithm/ZOrder.java
23a25ef37c388b586b61d9dfe4b47691 *java/src/usf/saav/common/jocl/joclController.java
af763996d42854e5718c164adcec830a *java/src/usf/saav/common/jocl/joclDevice.java
c688933363a052797eb6b9f33761bd87 *java/src/usf/saav/common/jocl/joclEvent.java
43a5664df00bbc0341d41516de2eaba7 *java/src/usf/saav/common/jocl/joclException.java
0ea3a1f11e6a292a1998071106b2017a *java/src/usf/saav/common/jocl/joclFileLoader.java
41d67a827a05b13c321d7fe9fd5fd7bc *java/src/usf/saav/common/jocl/joclImage.java
f2b81909f149b7c0bb52d4b7bdff1510 *java/src/usf/saav/common/jocl/joclKernel.java
05a0495300622b21a8653d0df811f2ce *java/src/usf/saav/common/jocl/joclLoader.java
8eae904b3a6ee7587f2f2a0853c07125 *java/src/usf/saav/common/jocl/joclMemory.java
6a0abd03d4f62c1458ddaa22e340271a *java/src/usf/saav/common/jocl/joclPlatform.java
ed287738f60cc287bec2baddde16d36a *java/src/usf/saav/common/jocl/joclResourceLoader.java
23f4d546d57bbd978c4c383d7b50e203 *java/src/usf/saav/scalarfield/ScalarField1D.java
04454b8d0c54b1cec134b370cd80c70f *java/src/usf/saav/scalarfield/ScalarField2D.java
58f9762ebb664b4e44b24ab602421e12 *java/src/usf/saav/scalarfield/ScalarFieldND.java
154ea17cf6f7d4f686cef9a9f1b3801b *java/src/usf/saav/scalarfield/Synthetic2D.java
e1ec8445ec1a96325dd9dc308352a21c *java/src/usf/saav/topology/TopoGraph.java
d870c31b7b3792ac0b17a2a106d806e9 *java/src/usf/saav/topology/TopoTree.java
cff438f4b824544d0a6593ed79ce056e *java/src/usf/saav/topology/TopoTreeNode.java
a28c7d08ea5e48600847bb7bd21f045c *java/src/usf/saav/topology/merge/AbstractAugmentedMergeTree.java
417856f6f0236c712345b7d14ce236d8 *java/src/usf/saav/topology/merge/AbstractMergeTree.java
63250d3665f0768ff2821c526b16fe3f *java/src/usf/saav/topology/merge/AbstractMergeTreeNode.java
975f8b9aa368dff00ee5722e3adeeb8b *java/src/usf/saav/topology/merge/AugmentedJoinTree.java
828c41a6557f30843eefc4127b0a39a5 *java/src/usf/saav/topology/merge/AugmentedMergeTree.java
1f4222945bb54611287e40762d6613c1 *java/src/usf/saav/topology/merge/AugmentedSplitTree.java
4a02049407669d622d80456066ae0d11 *java/src/usf/saav/topology/merge/JoinTree.java
e79d3ab24cdea5ad54960c0ebafdc72c *java/src/usf/saav/topology/merge/MergeTree.java
506b56d226560340098d78fcf8513080 *java/src/usf/saav/topology/merge/PAugmentedMergeTree.java
0c0f75393fe43a2e6e9fd401ac5fe8e0 *java/src/usf/saav/topology/merge/PJoinTree.java
350977ccbece6c85fa2631836efc4ad4 *java/src/usf/saav/topology/merge/PSplitTree.java
c0a1d23e6662bec02e22fb3304879e4a *java/src/usf/saav/topology/merge/SplitTree.java
b4cd403675a144268305e9af81fed0f7 *java/src/usf/saav/topology/reebgraph/ReebGraph.java
aeeba57c9380dabfe2a618a13b1c42a7 *java/src/usf/saav/topology/reebgraph/ReebGraphLoader.java
6b5fe75f8beb4623a21d1df796476ba3 *java/src/usf/saav/topology/reebgraph/ReebGraphVertex.java
56a51dc380cc052ddbddbbac72c6b19c *java/src/usf/saav/topology/reebgraph/pairing/MergePairing.java
817df657c26b641b8bc48556dbea1dad *java/src/usf/saav/topology/reebgraph/pairing/Pairing.java
86f00b9a532384a12279ede8e5fdffbf *java/src/usf/saav/topology/reebgraph/pairing/PropagateAndPair.java
abfd5a7bb1d535954c8b5e6caa6b43de *man/as_reeb_graph.Rd
89028f4cc0fa223af1a9203a63716ccb *man/figures/README-persist-example-1.png
9b8ed138ad6a1e4202b4800d87151897 *man/figures/README-plot-example-1.png
8ac15269736c27a720779dd8c5fea626 *man/reeb_graph.Rd
e7440545d7b8150dbbd086a12c8eb3fc *man/reeb_graph_examples.Rd
3d29c05bf7b2b98b7eaaad69a8acc70b *man/reeb_graph_pairs.Rd
c240fd0071e61fc727daa743fbcbadb0 *man/reeb_graph_persistence.Rd
a7b3b5328150ce0cc09fa014a8d1d97e *man/rgph.Rd
e3cf577ab3c6ef1a8711b3abce6aa94c *tests/tinytest.R
78bf1632c07a014654d6402b8dc2b032 *vignettes/benchmark.Rmd
