147e8eb835885d9e957b4bbc99725b81 *DESCRIPTION
3af4547a0d2f0843ce580a7da171b3ff *NAMESPACE
c44593a314a893ccbb5f4da2006aeaad *NEWS.md
484d914feeb5db9fb92935270f5a2b4e *R/NCBI.R
395de00e380e65d5f838f68c4e50aa63 *R/aln.R
16b8734702d0ef82f5ea98569b4f2846 *R/bam2DNAStringSet.R
2be02e8dcdb4b751e70e1ea9225c83ab *R/consensus.R
b938895a08351cee4713c304b7ef0b48 *R/fa_combine.R
f4c55c4a46088e6269448b73a3fbbe44 *R/fa_conversion.R
9ac8ba39ea325fa5d21cdd50f08f09a7 *R/fas2phy.R
718a6c08fc30623915ea5f2457b71025 *R/filter.R
39378064dc26ebb8d9d7ff4901579c45 *R/get_id.R
c52160999e5e158ffbca94e1e42c4e38 *R/hamming.R
6f039552274fda89932af43b1d10cdaf *R/mega.r
7de66b73e1795a5486cc739127ab02f0 *R/phy2fas.R
e87ad4dc1edde0d4ecf4561cb496e632 *R/phylip.R
365dfcfa6637a3e885544e1bbf0fe3cd *R/read.R
3cef5f52c30738b09dcf8921e91598ac *R/rename.R
52283874a2552369b03802fa5c3158bf *R/renameTXT.R
65f3cd9409675120eb5e2dc6d1611bec *R/replaceInside.R
9bc899d38c82b674d957fb26499552f3 *R/seqlen.R
b2e7d7f0f04342c5fc5d51d4e7bca736 *R/utilities.R
cb319501988a6470af2434b3e09d8d00 *R/write.R
e0545ef104e7f6e3a13ff0510c670ba6 *build/vignette.rds
445886651c7ff92368ce6754605337d8 *inst/doc/seqmagick.R
2fe099f6e87bae34a2e5925ad26df52a *inst/doc/seqmagick.Rmd
9a2e88e51bd663f711049bf74681385c *inst/doc/seqmagick.html
dcb1cbe277e31f87c516498e54998c4f *inst/extdata/AB115403.fa
856a7fa7d2d273786a9ca3b479b104eb *inst/extdata/AB115403.gb
cc114e21e49b47a3a4702be3e9a10e92 *inst/extdata/HA.fas
72d469bdb7fe23ee3ff7a049566ad5f1 *inst/extdata/HA.phy
c5fdc83d7d187bf0c6da31880bf1a8f8 *inst/extdata/mega/Chloroplast_Martin.meg
2645f9d2bedae0b5ec181523cc130899 *inst/extdata/mega/Crab_rRNA.meg
c53714434a538e57bdf18aa50b5147f9 *inst/extdata/mega/D-loop_Vigilant.meg
2e5ed9d9409fc1b857f68b4e43647288 *inst/extdata/mega/Drosophila_Adh.meg
3b21d691eadddac187f795f8e283cdd8 *man/bam2DNAStringSet.Rd
a3d546387937fb5f221de543de724953 *man/bam2DNAStringSet2.Rd
bb310d6a21a705a0e771e92c3f1680fe *man/bs_aln.Rd
5a5f36e582beda72b1f1e8c6437af5e6 *man/bs_filter.Rd
87ecbfa0671d9a4afefeb5ef22d58f57 *man/bs_hamming.Rd
3c27161a492930b2e0c78ff920ecb4de *man/bs_rename.Rd
d9617d8e5b7744c8da7e035c8c155b44 *man/consensus.Rd
5c9f9799dc596e169aeba8411b72339d *man/download_genbank.Rd
713a24a470455176f557aeb0d6bc4a30 *man/fa_combine.Rd
6be8cffbfea462089b9ce214706bd397 *man/fa_conversion.Rd
0117ec74b701e1259cd83befe0ea2345 *man/fa_filter.Rd
132363050c114d8b5550033c61d01db4 *man/fa_rename.Rd
0dde1b45089890ccfb35fd36ff7ff236 *man/fa_write.Rd
4d80bb7a84cd70d9aa3afd69b8c6f668 *man/fas2phy.Rd
7084f16534c2158e8301ed56c32b9996 *man/gb_read.Rd
00337e26c01ae8a866fdfbf71b75803a *man/get_id.Rd
04ecb24f4e85f36ca7d5ad0851d8237c *man/msa-read.Rd
58cfac2419dcaf1daa6119ecbb49becc *man/phy2fas.Rd
02706d524088e659228320d85b868c23 *man/phy_read.Rd
3470bbc71ec9e36364aa232d48371508 *man/phy_write.Rd
d992716400f05a223581e9d9d0796867 *man/renameTXT.Rd
2f0e434f551ee86f66b8105506cbb708 *man/replaceInside.Rd
0b3e94986bcae18a1c34c41f6499208b *man/seqlen.Rd
2fe099f6e87bae34a2e5925ad26df52a *vignettes/seqmagick.Rmd
81051bcc2cf1bedf378224b0a93e2877 *vignettes/seqmagick.bib
