60e0d5a0997d40ce7e0042f0a1f6b589 *DESCRIPTION
57e7ffef8bcbcf74d0fd2f24c96a94a2 *NAMESPACE
b933207ad0c19257762b995ec2ac4730 *R/add.phenos.R
103b12e46d558b8b37c3eb8136e76d69 *R/big.R
bc5bd01be1400c58fbdf5bcf7306db97 *R/cmst.R
0bcb4f8b6009685ae0d63d2139a7f70b *R/highlod.R
74ea08f27428cbcd32935c1cd343b898 *R/hotperm.R
6e75c18121af3d2e3b1c133b06de311e *R/hotsize.R
9d957d0691daafd8c8c3cae7d42c84be *R/max.R
2691e0df2e1c4ad991982cee548e06db *R/neqtl.R
5a0221e370e2ec06215b5901605af28d *R/parallel.R
5973406c7885b09e6c49f3df11081bdf *R/plotcmst.R
43e15b98d5a239a39ff51bad8eeea7b3 *R/ravel.R
caa27fc5b3a369254761fa583adb8588 *R/roc.R
132a9f8ab6bb2cf4e7c569ebff41508b *R/rug.R
697902bf598d08d4cdaea474ca5d0d20 *R/runningmean.R
0f64e9122ec2af5bd8d4dfa17ff65802 *R/simcmst.R
e0ce999b19ba4c54273d23a8b8b06636 *R/simhot.R
0ce011177fadd2f28774f5d4ff602c8a *R/sliding.R
257b8e3a4afd0d1a435ad68c26f1fcf7 *R/study.R
dc2f482c9166cfc488dd0c0de6ee1642 *R/utilcmst.R
39bf135b5eb185681d74d06c18549a1c *R/utilhot.R
d41c35875c29eff957f88d263399c6ad *R/westwu.R
d41d8cd98f00b204e9800998ecf8427e *README
c11d97bf0278ba75468f817255c876a2 *data/CMSTCross.RData
89bff8163dbfdb0b2e5fe28276ecd4fa *inst/deprecated.R
d6ba35863c52c32349ce63a713b56652 *inst/doc/cmst.Rnw
e1ff7fd37d28d308287187fd47f46d6e *inst/doc/cmst.pdf
3b4ae999433e50910389135b1d7eb850 *inst/doc/qtlhot.Rnw
6eea94f85f5422d1d0c9275551bbab49 *inst/doc/qtlhot.pdf
11704113157929b53b0e2c5ba015ad3e *inst/notes/cmst.txt
52d8cbf0da7b5bdc67b82665b7e8c4c1 *inst/notes/code.txt
c15b74d7121a2ddbe21306b65ccd3b64 *inst/notes/perm.txt
6d4c95af46a1a4bcc321d888beccd874 *inst/notes/plot.R
1f353aa7e5840f8c82884698969b6b28 *inst/notes/vignette.txt
4f5aed9c48c35420d2fcf792196707d4 *inst/parallel/Phase0.R
8178038dca48891725c7d1386beb4b11 *inst/parallel/Phase1.R
5b4f049ad59aae7ee7efd58ae028a269 *inst/parallel/Phase2.R
817f9a45083324b22e3ca1fc93eba97e *inst/parallel/Phase3.R
c88d1fb262f39c3223b94e1293a5596d *inst/parallel/ReadMe
c031e3c89986ff8dbe7ac049bb582c90 *inst/parallel/SOAR.phase0.R
a5c3774fa0c5b298161fd419ec5bcb50 *inst/parallel/SOAR.post.R
0eac83f946b60f56fe187ddcd4a7760f *inst/parallel/cross.RData
8b9712f8ce05f9005356e0b06798357c *inst/parallel/params.txt
be0c94b6582c2f5f503730bb94833b21 *inst/parallel/runparallel.sh
0d8ae29e6c25592f1fb7937975a0be9b *man/CMSTtests.Rd
19953211b4de88ac4c743b769fa4207a *man/GetCandReg.Rd
a0d9688690f56d672a90cec7117b0a65 *man/GetCommonQtls.Rd
e16a5f2844aa0b97f10e69e6543d9bd5 *man/PrecTpFpMatrix.Rd
cdb8e3173159732116f20ff08da18515 *man/SimCrossCausal.Rd
692111bb7328f17b403106ab8dde4907 *man/add.phenos.Rd
e8cdb877d98ca4a5f27ad7fd42cd79e1 *man/filter.threshold.Rd
fb6907ded1db3d56c14d94389360759b *man/highlod.Rd
7ebe43fede89e9a04ca6a81e0e17b8d9 *man/hotperm.Rd
a7faaf43638df9f53c350a4aedfb5d84 *man/hotsize.Rd
c7ca914d7fc9cf321a7e07750fcf1f32 *man/parallel.qtlhot.Rd
3da742be31fe06f70772508c1a51a2d6 *man/sim.hotspot.Rd
42d951c0229a8e83cc216a2e834e204f *man/westwu.Rd
7ab4aae0ebff42ce151372d97076416b *src/Makevars
038436d92771c38855a79685ab12df23 *src/runningmean.c
22acf45d7a3bbdf3f9a177f9987bd1a6 *src/runningmean.h
de1aeda81e8c8ab6ded25df5ae2dbfab *vignettes/Sweave.sty
d6ba35863c52c32349ce63a713b56652 *vignettes/cmst.Rnw
3b4ae999433e50910389135b1d7eb850 *vignettes/qtlhot.Rnw
eb8b95adf890e0b10c31054ee13a2467 *vignettes/savedperms.RData
