a31ea366d0b93786ca874ec777f43670 *DESCRIPTION
9a31ad3f9aa93ac7827254496065655e *NAMESPACE
c6655225fbd4eeec35115226868b2180 *R/E_step.R
e41de56683d052f5901b4847a730152b *R/E_step_final.R
69561c08f5a46e389f1a9ab7de134fef *R/M_step.R
6984b4095be87c8c40fbb0ac913674d4 *R/RcppExports.R
ef343cb3a926616b624158d4adc3b52c *R/SetClassDefn.R
b7cb61d96bf907865c54fea2ec8b5a26 *R/basal_dataset.R
9eb924816915af44f60cc1cb4a6eb10e *R/checks.R
60c89a9dcc2aec41e63b79384ad06966 *R/control_options.R
850ac6e8ccead197d520ae3f0fb4f770 *R/family_export.R
3c943c76f2acd7ce4255b186e5ddfc05 *R/fit_dat.R
a71751f8ab164abeeab0fbe0edcacaa1 *R/formula_data_edits.R
3e8b710e15f930d24e42f5d822553580 *R/glmmPen.R
c92a4972475b6a5ef90efdafa8fe0f24 *R/glmmPen_FineSearch.R
d9220c640655098527ce7861e27ffa6f *R/logLik_Pajor.R
0de523d6715b37d28309461c12a1f57e *R/methods.R
cf92098c1e6ddaf2f14cf1756f2e085a *R/prescreen.R
91d6bacebd47e5ec7de58c186e882e3f *R/sample_mc_functions.R
b3123a101ef58127ad943df2b14951a2 *R/select_tune.R
3214a5319ead75f3a7da65eefc3803c7 *R/sim_generation.R
e96e4df78882b52776d9a5f8de0a36c4 *R/stanmodels.R
4d12334d55bdf0cb6267f4c3dd7aa204 *R/var_start_init.R
c06b4593d1a3b496f92333671e032ede *README.md
1cc60bdd8610449d30184e0bb374bf46 *configure
363506993327ae3b7de4216fa3a1aa2b *configure.win
3240102badcd0213ee167e2ea2590852 *data/basal.RData
c4289b9bd666b615b8095d1ef222bbf7 *inst/glmmPen_1.5.1.10.pdf
855c064dbf8deaff96c8dc8a87169109 *inst/include/stan_meta_header.hpp
1f8d9f97de86e3b68b558e8ba574cb6e *inst/stan/binomial_logit_model.stan
6781327e956f09bdc646d43492e191f4 *inst/stan/gaussian_identity_model.stan
0a69072d1af781bf21b9b4abb3ed1a29 *inst/stan/include/license.stan
27698185e7c830b474fe496d7ae85e5f *inst/stan/poisson_log_model.stan
4c32de6ab1a76cddfbe7ac46256b9c90 *inst/update.R
f10f9bf84b40e9d01a684fbcf3bc5b53 *man/LambdaSeq.Rd
a1022035fafd2dbbae344084283ed179 *man/adaptControl.Rd
4a03a6313ae3542f30678b7aefecb0f0 *man/basal.Rd
7bab0ac09324e730ac726f130ef77cc8 *man/fit_dat.Rd
20055672f8f600a186ba9e8f286653a3 *man/glFormula_edit.Rd
96c98810afbbbf38b7dd8e72b279bf3e *man/glmm.Rd
3db36f125b747e9e6537c7061e05f271 *man/glmmPen.Rd
ab8f87e90594b049332ff3ff6c788b14 *man/glmmPen_FineSearch.Rd
7bec561f360901f45db4fe82495f9065 *man/lambdaControl.Rd
d55ef96d04d19cfbca78e708a7555208 *man/optimControl.Rd
d61c4097bacd412ad553a624a3973869 *man/pglmmObj-class.Rd
867623c8bac82e1f8045171e051b14a2 *man/plot_mcmc.Rd
7f1ca9fd1839623e5e35ae2e8a068e37 *man/rControl.Rd
50e9ca7e3b0a174484eb20d1370b932b *man/select_tune.Rd
d4896449e211b1afd22681aa2071bc85 *man/sim.data.Rd
763c784cb4a40e2f15482cba532236b7 *src/Makevars
b3fb5a2a401392359b25252320728e4b *src/Makevars.win
329c1fd7b8dc6e51205c37f1ba38a50d *src/RcppExports.cpp
20a3513dbb360445ffc2f71fcb23303f *src/coord_descent.cpp
1113ebdaad67af2d29b28778aade3dd1 *src/grp_CD_XZ_fast.cpp
f904296acda1b863e5df382ab5d54f68 *src/penalties.cpp
3c77965c41a0ded4474793c577534605 *src/pglm_fit.cpp
7b6b7ab59186d8daddd5e427c218306c *src/sample_mc_inner_gibbs.cpp
e415c7572e99dad15ce70561c956825f *src/sample_mc_random_walk.cpp
bce917847550119a0dbf636d6b1a12cf *src/stanExports_binomial_logit_model.cc
cdbe112733b864ee0d0e52f9f6a8680b *src/stanExports_binomial_logit_model.h
042b0fe31d1743ba7023d7f6e148b2c9 *src/stanExports_gaussian_identity_model.cc
c15a7d33ac6bce677cde21947bdc2a9f *src/stanExports_gaussian_identity_model.h
1b7e853ff8b69ee6120af6a5ce46c04a *src/stanExports_poisson_log_model.cc
c31a5d3eca1fae9335e1f4b541e081f7 *src/stanExports_poisson_log_model.h
a15c60f563f87e859e7456b2dce00909 *src/utility_CD.h
cf60c55a88bdb97c4ee37dea78e051b2 *src/utility_glm.cpp
d21b973817f9707ff4b788586b0333a8 *src/utility_glm.h
0abd6b9665a6d71c2daa5b94713762ad *src/utility_grpCD.cpp
adac520570a035d077950c45146b4fed *tests/testthat.R
de69181caee6cea89f9fa6562a6ed00c *tests/testthat/test-args-input.R
97da9b0409bb54f649f592bdd50748df *tests/testthat/test-data-input.R
