d550df170d96e2e049caa814c303c242 *ChangeLog
7305284211be89b27f852884c0c8cf66 *DESCRIPTION
95683be60118e8fbd88a46f39681be61 *NAMESPACE
ff9d69e47f21a3c85bcc4283bd508c49 *R/GPrior-classes.R
931de3028c29441c974258ef270ee191 *R/GlmBayesMfp-methods.R
61670d4324a9a9a4b69fc658c8f33473 *R/GlmBayesMfpSamples-class.R
4b7a2443a0b8057cfdc01d209708a819 *R/GlmBayesMfpSamples-methods.R
3418bf0af8c9aba3ba719ccadb602f72 *R/McmcOptions-class.R
f0b0966195f93a9c0a35d40f77dce442 *R/McmcOptions-methods.R
df733a64ecddeea56e335a9719ee3988 *R/RcppExports.R
79ea1153a7d07ed8c749770944bcd01b *R/computeModels.R
24a66b12ca60c179bba8ef848d4e9fa5 *R/constructNewdataMatrix.R
b29bce96c982b7623dd0e606ada966b9 *R/coxTBF.R
26e884419e17656fcad7c59d55ef77ce *R/evalZdensity.R
d757ba903d953abf50075cdf367b857a *R/formula.R
9a2b25b3f5e9ab04f62de50195e938ce *R/fpScale.R
d1a317b2f847d0188b85488f9282f497 *R/fpTrans.R
d484b47d29ecf57066e33b3aaaf7d0e2 *R/getDesignMatrix.R
dae66a5946ad04adaedf407dae1bc858 *R/getFamily.R
2c661b5c1d4220da4bcdbcc18d87ef3c *R/getFpTransforms.R
e94ab8dea7c29c117ca0734b10fcff94 *R/getLogGPrior.R
d2f3dc7addeba69cc18e9aa09d5f2bf5 *R/getLogMargLikEstimate.R
48b059cfe728ed4d3d0c750327b24311 *R/getMarginalZ.R
d463af3b7446bc0e1147e5ab966aebf9 *R/getModelCoefs.R
8ac7f2e20455353e2a98d588a7f15837 *R/glmBayesMfp.R
349e48e632275c2c8c34fdfcd4b8d33f *R/glmBfp-package.R
fb8a322c4c740ec22dd313cc639e2e68 *R/helpers.R
35c575bfc28f386289e40c3860cc7ed6 *R/hpds.R
fd9992498f11030912f29f91af0f28fd *R/inclusionProbs.R
d5f45b6b6ea20df008acd6f8140d1a29 *R/optimize.R
8239be38899e830d11686d958e703075 *R/plotCurveEstimate.R
ca1885c8458abf108b6c9201a1d41fc6 *R/posteriors.R
828dc04ab71c53ca105fcaeb88610f36 *R/predictCoxTBF.R
04fc26c9daa1c58d0f646f7abccffadd *R/sampleBma.R
7a28dc0336d85a7fbcb83e8d3f1e23b7 *R/sampleGlm.R
d234afe51582e23b9ef0b7b1fc3b1efe *R/testCox.R
0ed78ebb9d28d6802fc7906426eb4e67 *R/uncenteredDesignMatrix.R
a0c13f7a0af6b55f36bff6aa6ae0f103 *R/writeFormula.R
4d42f9cfbaceaad3c12c55c4445696de *TODO
c1ef5d3228e50bb39860c2f413685a96 *build/vignette.rds
b6a92d13c2e484edbdd1aff8bceba3c3 *cleanup
702867a500b3bc31c3307610aaa23270 *configure
5de88376a61d665c8239380c8b4ef7ac *configure.ac
9e5ffc5e94d9813bf01d206b78bf72ff *inst/CITATION
a58b4ba45dfdd437bd49b1cc42a6f05e *inst/doc/examples.R
52754b93f41deb545d3ac2bcead64057 *inst/doc/examples.Rnw
ced9dc184edfd5ba917b308a129165ae *inst/doc/examples.pdf
bf9702effc81fe4a6807951151943d1e *man/CustomGPrior-class.Rd
0ac606297448d7ec2e53f9607ed6c790 *man/CustomGPrior.Rd
3f880790ada54f266a69186e6bd5ef61 *man/Extract.GlmBayesMfp.Rd
cb48dd3706047dfe9355edf1e523b95b *man/GPrior-class.Rd
65229437ff9c6cba8f74d24556cbda2a *man/GlmBayesMfpSamples-class.Rd
a9345bf0b17260066cf7e199bf23e648 *man/GlmBayesMfpSamples-subsetting.Rd
739bde37b88a2d05d5e482793acc60e6 *man/HypergPrior-class.Rd
b76dc0c65f0163b0aa97183c761fd6ec *man/HypergPrior-initialize.Rd
cee1e40e1bc9c044357542939a94e1e8 *man/HypergPrior.Rd
2bed60582564631ebec7d8d930c48d23 *man/IncInvGammaGPrior-class.Rd
f80eab4cd94d38bb273f2cb1bfaacdb0 *man/IncInvGammaGPrior-initialize.Rd
957fc093fbf2b7947d05c59b11f03067 *man/IncInvGammaGPrior.Rd
7e549ee508709affb32ba94e8d7e88be *man/InvGammaGPrior-class.Rd
f81455e6d42475ed4f0a6974b5b2f505 *man/InvGammaGPrior-initialize.Rd
4c0f0ab2db2484b01e64865845492e9c *man/InvGammaGPrior.Rd
ca122e9a2a3b4bf0778facb750f50810 *man/McmcOptions-class.Rd
406f2a70f281b5c5c0e7bfdb74bbb6fd *man/McmcOptions.Rd
80d13151e67f69326cba96119002f005 *man/as.data.frame.GlmBayesMfp.Rd
7e38f8b95dfcda97a376a02d0d0516b9 *man/boxTidwell.Rd
698b72fbe80078443a69ec6944fd5c52 *man/computeModels.Rd
8756976b2688000dbfa3cdabaa73efc4 *man/constructNewdataMatrix.Rd
506d810fe04517d8396cea7f77c282de *man/convert2Mcmc.Rd
97c7917a699872dae1632468606ea4a6 *man/coxTBF.Rd
c3fbaeb08d4877eab24a9511fc4e193e *man/cppBfgs.Rd
04fe2067583db8056989c2698765317d *man/cppOptimize.Rd
8ea7448ade5f101e78b0c3d1c3bacf1b *man/empiricalHpd.Rd
f4fb9d85a2b5957a130256e3b1ba2376 *man/evalZdensity.Rd
27a98bde3fa5fef6aaa02d336f67cc29 *man/formula.Rd
9d8b89641bf92ff6ef0bee4a25ac5db2 *man/fpScale.Rd
a9ee1a720be38e6f585caae3a1faf903 *man/fpTrans.Rd
d4017b0dc03a0d7dc943aaa2d7533d69 *man/getDesignMatrix.Rd
7edcbd07d5eb0f0e6daa8c5b80bbc2f5 *man/getFamily.Rd
3c421f5feba111e1f22a7b2517e9d64f *man/getFpTransforms.Rd
e70c41e2755892adf5b6125e2c7bdb1d *man/getGenerator.Rd
b9e3f7520d6c3ec74ca3b55cc7105292 *man/getLogGPrior.Rd
75d38c3764a90efeeaba0e01cd32cba5 *man/getLogMargLikEstimate.Rd
88e426240db70463819078dd3600a3b3 *man/getMarginalZ.Rd
30166483b60fdc2a0d04794e92ae17b9 *man/getModelCoefs.Rd
2370f987b29d1edeac4382ac82fc3178 *man/getUncenteredDesignMatrix.Rd
4df9cc4afea59bfca4b4ea4668e535fb *man/glmBayesMfp.Rd
c1bf4bccfe0c15826d8f7b02e3bf6123 *man/glmBfp-package.Rd
e267d462beb75f0fecb90ca3ca9a6ada *man/inclusionProbs.Rd
1ffa48722f3cc18b5d56e2275b874a81 *man/is.bool.Rd
f24d4fc4946251ec5b8f8417abbdc7a0 *man/logMargLiks.Rd
f1bb74114f174ba7cbde17874201ac88 *man/logPriors.Rd
470b408f3c3b0d867787a3c74f823243 *man/plotCurveEstimate.Rd
a729b3ffb21d13262a0ee69d1e7c39c7 *man/posteriors.Rd
fa8fe9e77f5ab477617978667e186097 *man/predict.TBFcox.BMA.Rd
d5667e9b158173c8190ecc8069772fab *man/predict.TBFcox.Rd
74d88f5dee4be00184b9505dbdd09335 *man/predict.TBFcox.sep.Rd
ebe8d4a043f7276470086111801ccf6f *man/print.GlmBayesMfp.Rd
040cf73bc1b31b6ee95e00751a4619db *man/sampleBma.Rd
860b057beabcd5210c6af8b183dc6dab *man/sampleGlm.Rd
3f66aeeff65aa20e435f644ab944a45b *man/sampleSize.Rd
10e4ab098ffce1e865958c4386450800 *man/scrHpd.Rd
949fdfc6257e885d1aad2f6136e02637 *man/testCox.Rd
b1ba1bb78f0b3242a4d9a1dad838d352 *man/writeFormula.Rd
2c42787c15cf27f2a8c1f5b40ddd929f *src/Makevars.in
ed6a4aab9014daa5562bc202d9f3bf3c *src/Makevars.win
7cfc7b22054487c032c7f8de32f9ab68 *src/RcppExports.cpp
313780a1b5d9fed8971402d288fd444f *src/bfgs.cpp
ac84d1166072b9127184de76bd0d16b4 *src/bfgs.h
2b36094ca0c4341949fd998ce3a8267e *src/combinatorics.cpp
5986efa30aff16b1d225d5751a5fa415 *src/combinatorics.h
ce3de93bbae5c9199e84bca233956008 *src/coxfit.cpp
ab0a939e9d5385fe135b241a12413348 *src/coxfit.h
80adff1b73e5f55957218836e63452f0 *src/dataStructure.cpp
137ff593decbb51dc93635c949f4ef16 *src/dataStructure.h
6215b4b0e6219a60ff6649f2c69505ca *src/design.cpp
b406221a4a71f90bc3f0121eb469f1a1 *src/design.h
e0a45f8ce1e21a797a5b1357a53dd0b7 *src/distributions.cpp
c34ffb89201a9b1694bd9170b915e02e *src/distributions.h
a0a57a1b3106550be1c31413fad8539b *src/evalZdensity.cpp
ad11925425d1319dca47a8c2d2578bb1 *src/fpUcHandling.cpp
2e05c245e363ad458697cfa94b74c434 *src/fpUcHandling.h
a9328f8c2446bbb61316452f1e65dfe4 *src/functionWraps.cpp
dad8a72e31bd2238271c5d8f6ba28434 *src/functionWraps.h
93bdfee9499ea0d21019fe1969f7ea5d *src/glmBayesMfp.cpp
b5555ffb98b0908e6a86bde05164133b *src/gpriors.cpp
745a523056999845447fcad374c64ade *src/gpriors.h
92db2e341b0bd0b26fd8bd793f583efd *src/iwls.cpp
ab7be37e3589f95058a3b55a2333acad *src/iwls.h
8c47961e1e88256a14252997b65d59bf *src/linalgInterface.cpp
095faf8af655557faebd0856c63e3ae9 *src/linalgInterface.h
7e5218285bb0123f9c30349d36665396 *src/links.h
c25c2833f9b89fe2f5a960f092779e9c *src/optimize.cpp
72d1cb02c3f0ede05f06840b5fe5ba0d *src/optimize.h
9d0e3916f3b9a664f93b4949fcadb1b5 *src/predBMA.cpp
91fb52a7887491c843ca76d9213abb36 *src/rcppExport.h
441ccd14628d104d51bc72961d3b84ce *src/sampleGlm.cpp
028eda22c65450e9bc874a52c5e874ec *src/sum.h
857d20f5f75a42de1ae48e44885d658d *src/types.h
7eee2c45604c2f75f75a7c6482af4087 *src/zdensity.cpp
d33959e6379f1ecd2ffe8dbcf71b6922 *src/zdensity.h
07678dcfbaa6cbbc7e516bbaf5bf689b *tests/optimization.R
52754b93f41deb545d3ac2bcead64057 *vignettes/examples.Rnw
c63a61763a1528a1cadc3344025d1064 *vignettes/examples.bib
