ae1b96f445b804d17617468aa50f2abc *DESCRIPTION
4c2519d576e0c8920b623ca7a70ae079 *LICENSE
0ed3ec7b751d9405ec6917075a106c6c *NAMESPACE
f89be4b73c614bd49dc9d5392f14b134 *R/SNPfiltR.R
bc4b3a6a63b21b5c6eec295359c65101 *R/assess_missing_data_pca.R
a189e90945d6435ba9d2370b0411b836 *R/assess_missing_data_tsne.R
c3953464bc7fd36bfda974c46a97945f *R/distance_thin.R
99327f960e7727e1254357f1a46ea3ae *R/example_data.R
63d87f47175fabd2736e88cd835bffe5 *R/filter_allele_balance.R
77b7e48a706d3ea0579be32e88867f1b *R/filter_biallelic.R
a06f6752fca07329f052957bb11a58fe *R/hard_filter.R
68892b30aa1ddb0bd6e0d2f1e77a84e7 *R/max_depth.R
dda94f35e4289483de35ab8fa0d60455 *R/min_mac.R
62b4e237373fe1b2c98627e971ff64a7 *R/missing_by_sample.R
bf966f2268c4f8f30f09befc688bb47f *R/missing_by_snp.R
69a138ded1d50b8acb8738be7a730af6 *R/zzz.R
7c9f41c6dbbd34c4b008a471eaa37fab *README.md
970c53ffa4698c48a16c3789b9468d7d *build/vignette.rds
dd80dc03b72202e90c8e87f709c0c23b *data/popmap.rda
f003e8abb4eda2529672b98fe2a67b30 *data/vcfR.example.rda
335e01e56df598ed4c51abffefc9bb8e *inst/doc/reproducible-vignette.R
1c22e8cd48e93fca118b9e5aaa144881 *inst/doc/reproducible-vignette.Rmd
fcfd8f751d6b430d77ccfd1afb4c72c9 *inst/doc/reproducible-vignette.html
515ce9bb43f815173fdfe7429e5fbb9a *inst/extdata/RMarkdown.qc.submit.script.sh
8395e392d256a584c1df3d12245c7eb6 *inst/extdata/fastqcr.Rmd
6f7e5e13388d192a3300f3e0adabf9b6 *inst/extdata/make.benchmarking.vcfs.R
8db4419c8b1a3267810f641f39d6409e *inst/extdata/make.toy.vcfR.dataset.R
5eea73ff0c90aa1161a4c72492be61a4 *inst/extdata/rhub.check.package.R
b284e90a6053cefd380ee93e5fc67777 *man/SNPfiltR.Rd
b5bd3c60212b52af72eccb528d13c0a8 *man/assess_missing_data_pca.Rd
5aed26c7b296102e8365896474892905 *man/assess_missing_data_tsne.Rd
68e5ffae6f76c29dad53b9f0d7fb6259 *man/distance_thin.Rd
46c673b0c1989b61e35673be660fa8d7 *man/figures/make.logo.R
8581429e3be0ca62e908f5fe7be8e143 *man/filter_allele_balance.Rd
e38c25279156382610ab879d28ae496e *man/filter_biallelic.Rd
ea6d9f3faab627c26d16b721d15d0fca *man/hard_filter.Rd
4670661c6b3b8476578549b5f46652ca *man/max_depth.Rd
99c52acfb18bc6263141a1e360835ac5 *man/min_mac.Rd
752513d7345fd9455222ce924b324c8d *man/missing_by_sample.Rd
a844e61af33968b856f5b433580342a1 *man/missing_by_snp.Rd
34504c2cc4722d767bb3c179c1693e4c *man/popmap.Rd
6adaf9ad816e2e298158f033c1f8d2c9 *man/vcfR.example.Rd
5d6e76fc8aa761af7a34bbd57b505ca9 *tests/testthat/test-allele_balance.R
3e532dc417bb47f04d3b9910231dc385 *tests/testthat/test-assess_missing_data_pca.R
ba848b45e875c58e6826e02356b76a5e *tests/testthat/test-assess_missing_data_tsne.R
da62e011b5105386b733a295e17070b6 *tests/testthat/test-distance_thin.R
c5551caeb5b8995b453f51c70c6678d0 *tests/testthat/test-filter_biallelic.R
fda52ef4568c0fdbe7f46edb58832c71 *tests/testthat/test-hard_filter.R
1dfa6964bb86c4465fedcdd346e74a88 *tests/testthat/test-max_depth.R
07738c84966d65d7b51c40f8ccb36225 *tests/testthat/test-min_mac.R
d4809c4eddf3bc9c438063d80e169988 *tests/testthat/test-missing_by_sample.R
deacce638a8c3196979122f222ae552e *tests/testthat/test-missing_by_snp.R
688bd97e14d0d5a9f3d1eaae5ba21c97 *tests/testthat/testthat.R
1c22e8cd48e93fca118b9e5aaa144881 *vignettes/reproducible-vignette.Rmd
