de3e7d4ae4b68b264a53bb45bc5cd59a *DESCRIPTION
80c569afc046ed3b7fb76af96e0b0308 *LICENSE
d2054e7d790cf6961ae66c118b7cec00 *NAMESPACE
5285d0132059b8c147249ef68ab55d26 *R/PACVr.R
863eebe74c83a612a75b97572e8f9f4b *R/calcCoverage.R
37f9172d351f85bca9bd495db3537923 *R/generateHistogramData.R
493be5335a45af40f3945689c1a77278 *R/generateIRGeneData.R
519aad6523145c1c92fcb9121d3aa965 *R/helpers.R
a36c1c386f7cbd628da24a272e82e3ff *R/histogramPlotter.R
6f67bf0828abd3ba4672d54302dd35ed *R/parseGenes.R
5218842b40bc19c3fb064a32e36b3ee6 *R/parseRegions.R
87f0057ccdaeb7858f9a8caa53d1f95e *R/visualizeWithRCircos.R
6fce847ec3b1995db4fcbd6164ef556b *R/zzz.R
ae0d89f96d208a27d5244c414c1ee032 *build/vignette.rds
dd28d418fdc5caf210c142be6d67e334 *inst/CITATION
cb81493e563f4d638f1645e612e32ea1 *inst/doc/PACVr_Vignette.Rnw
50eb9e1daf01a22433dc2648f3375b33 *inst/doc/PACVr_Vignette.pdf
885aaf97770e435d7c35c8238ae4f5ed *inst/extdata/MH161174/MH161174.gb
3702a9c3ba26727101d34ac940958bb2 *inst/extdata/MH161174/MH161174_PlastomeReadsOnly.sorted.bam
67ec9389545637e51f042afa0c8f1571 *inst/extdata/MH161174/MH161174_PlastomeReadsOnly.sorted.bam.bai
e8405b9e5fea8b25e6d27e7b091dc2e1 *inst/extdata/PACVr_Rscript.R
df3d149bfc54bb4a41fc0c3a6a219fd6 *man/PACVr-complete.Rd
5e3e8e26c7ac8f7ca12bbd2ca1541ea7 *man/PACVr-package.Rd
370475e69e221067206dc0f26ef2d69f *man/RCircos.Env.Rd
ab82eca41f0a495fb4d1ccc09e681200 *vignettes/MH161174_AssemblyCoverage_viz.pdf
cb81493e563f4d638f1645e612e32ea1 *vignettes/PACVr_Vignette.Rnw
