af305d2c3b529e589d51738d41eacf86 *DESCRIPTION
75de0fe6613c0cb7267d4115dec0159f *LICENSE
80651775e65b2e59f64a579ff91f459c *NAMESPACE
476d9720152438f4879813f649985752 *R/RcppExports.R
9681830bca9f9ba2be34161897b5e659 *R/data.R
8bd3ce11b43344f7ec33ff0787bcfd68 *R/helpers.R
89ba50c12b7abfaab0b2b8414f4730ab *R/utils.R
ef3d684b5df712d379885673cf594594 *README.md
8acc997e4bcf207de77c5b42f5abfbd3 *build/vignette.rds
320f46c6bc16730e7e4be15bd9a01180 *data/Evers_CRISPRn_RT112.rda
606faf9f32351f73e2ab63545d51f9d7 *data/Sanson_CRISPRn_A375.rda
8b84e8386514cad52008a5d9bd554ba5 *data/datalist
fb838e28aa600b4b90631741266269fb *inst/doc/cb2-tutorial.R
d4e9606185b0413c5fbec268db33f92b *inst/doc/cb2-tutorial.Rmd
997791ee24c9e85bce669c0de8f6d471 *inst/doc/cb2-tutorial.html
7caa3925001fcd5b96b0005003547eaf *inst/extdata/toydata/Base1.fastq
6cf0a8ac82eae578e9d51c162cafe613 *inst/extdata/toydata/Base2.fastq
1f18ec364a0e9cd12293a8cc61046188 *inst/extdata/toydata/High1.fastq
f38f7584d527b80fba902f050cf28588 *inst/extdata/toydata/High2.fastq
5bd8c3a850f938fc81165ecbaca4abb5 *inst/extdata/toydata/Low1.fastq
fc3b83b4506f3d7b1bb9f052902e94ec *inst/extdata/toydata/Low2.fastq
ac57ee2d93bc9d8ff564c5dbbc3cef47 *inst/extdata/toydata/small_sample.fasta
2498bbf3835e2a6a191181d590b74445 *man/Evers_CRISPRn_RT112.Rd
483672e84265fafc39a3147cb15b6d27 *man/Sanson_CRISPRn_A375.Rd
7c70e3848507b2e9facadcb244701739 *man/calc_mappability.Rd
4effad862ee930776564210caa832b64 *man/fit_ab.Rd
6043f53bf593e84fa5f8b79a4a0e9618 *man/get_CPM.Rd
11db3f97ec0f7dfdf68bd069aceaf6db *man/join_count_and_design.Rd
98502de95eea08062ae6d39b96d9859b *man/measure_gene_stats.Rd
0c4071e4abb8f23ca51d02b19f60a567 *man/plot_PCA.Rd
174fb81a4990dfdda14e44eb8ea7162a *man/plot_corr_heatmap.Rd
db510ff54ab2f3296243a91a11891438 *man/plot_count_distribution.Rd
96d9534d61d4da07e5a2123729723b48 *man/plot_dotplot.Rd
954b05ba90c6d680f3801056ca5fe015 *man/quant.Rd
50bcee5f85cd99e3a16b70efb117e76f *man/run_estimation.Rd
622f440b090db80c1f323fd960e1f7bb *man/run_sgrna_quant.Rd
b4fa9eb7a80aada5ba42a08c474fdc31 *src/AdaptiveHash.h
76a658d0b4916324b3d9aaa62b27a6cc *src/CB2.cpp
932d9c1eedd4f4b0e54aea23acf798c7 *src/Makevars
932d9c1eedd4f4b0e54aea23acf798c7 *src/Makevars.win
712247008e6fa01258948f7f3a738ae1 *src/RcppExports.cpp
3c76a7a8babb4b4526c2bf87bc41ff88 *tests/testthat.R
a89b41f3634e4f4ff95b46b45d7bc709 *tests/testthat/test.toydata.R
d4e9606185b0413c5fbec268db33f92b *vignettes/cb2-tutorial.Rmd
